No. words: 1782; after pruning: 1756


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.7 (1,1:968)  799  0.12 0.00 0.12  BG262734Ld06P067A06P067A121F1_050.ab1       78   891 (0)  C BG262734Ld06P067A06P067A121R1_050.ab1   (0)   891    79 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1    BG262734Ld06P067A06P067A121F1_050.ab1     1 
  455  C BG262734Ld06P067A06P067A121R1_050.ab1   515 
  459    BG262734Ld06P067A06P067A121F1_050.ab1   459 
  615  C BG262734Ld06P067A06P067A121R1_050.ab1   355 
  643    BG262734Ld06P067A06P067A121F1_050.ab1   643 
  647  C BG262734Ld06P067A06P067A121R1_050.ab1   323 
  651    BG262734Ld06P067A06P067A121F1_050.ab1   651 
  659  C BG262734Ld06P067A06P067A121R1_050.ab1   311 
Contig length: old 969, new 969

Contig length: old 969, new 969
New start: 0