No. words: 1752; after pruning: 1726


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:942)  795  0.12 0.12 0.00  BG262734Ld09P067A06P067A121F1_075.ab1       80   887 (0)  C BG262734Ld09P067A06P067A121R1_075.ab1   (0)   865    57 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1    BG262734Ld09P067A06P067A121F1_075.ab1     1 
  477  C BG262734Ld09P067A06P067A121R1_075.ab1   468 
  485    BG262734Ld09P067A06P067A121F1_075.ab1   485 
  521  C BG262734Ld09P067A06P067A121R1_075.ab1   424 
  581    BG262734Ld09P067A06P067A121F1_075.ab1   581 
  617  C BG262734Ld09P067A06P067A121R1_075.ab1   328 
Contig length: old 943, new 944

Contig length: old 944, new 944
New start: 0