No. words: 1767; after pruning: 1727


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.5 (1,1:947)  807  0.12 0.12 0.00  BG262734Ld10P067A06P067A121F1_073.ab1       62   879 (0)  C BG262734Ld10P067A06P067A121R1_073.ab1   (0)   888    70 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1    BG262734Ld10P067A06P067A121F1_073.ab1     1 
  370  C BG262734Ld10P067A06P067A121R1_073.ab1   580 
  390    BG262734Ld10P067A06P067A121F1_073.ab1   390 
  438  C BG262734Ld10P067A06P067A121R1_073.ab1   512 
  450    BG262734Ld10P067A06P067A121F1_073.ab1   450 
  478  C BG262734Ld10P067A06P067A121R1_073.ab1   472 
  486    BG262734Ld10P067A06P067A121F1_073.ab1   486 
  498  C BG262734Ld10P067A06P067A121R1_073.ab1   452 
  502    BG262734Ld10P067A06P067A121F1_073.ab1   502 
  582  C BG262734Ld10P067A06P067A121R1_073.ab1   368 
  590    BG262734Ld10P067A06P067A121F1_073.ab1   590 
  638  C BG262734Ld10P067A06P067A121R1_073.ab1   312 
  642    BG262734Ld10P067A06P067A121F1_073.ab1   642 
  646  C BG262734Ld10P067A06P067A121R1_073.ab1   304 
Contig length: old 948, new 949

Contig length: old 949, new 949
New start: 0