No. words: 1779; after pruning: 1725


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 16.8 (1,1:942)  823  0.36 0.00 0.00  BG262734Ld11P067A06P067A121F1_071.ab1       56   888 (0)  C BG262734Ld11P067A06P067A121R1_071.ab1   (3)   888    56 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1    BG262734Ld11P067A06P067A121F1_071.ab1     1 
  631  C BG262734Ld11P067A06P067A121R1_071.ab1   313 
  639    BG262734Ld11P067A06P067A121F1_071.ab1   639 
  643  C BG262734Ld11P067A06P067A121R1_071.ab1   301 
Contig length: old 943, new 943

Contig length: old 943, new 943
New start: 0