No. words: 1476; after pruning: 1450


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:735)  672  0.99 0.00 0.14  BG262734Sn26P116G10P067A121F1_065.ab1        1   705 (0)  C BG262734Sn26P116G10P067A121R1_065.ab1   (36)   735    32 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1  C BG262734Sn26P116G10P067A121R1_065.ab1   771 
   48    BG262734Sn26P116G10P067A121F1_065.ab1    12 
   52  C BG262734Sn26P116G10P067A121R1_065.ab1   720 
   60    BG262734Sn26P116G10P067A121F1_065.ab1    24 
   64  C BG262734Sn26P116G10P067A121R1_065.ab1   708 
   68    BG262734Sn26P116G10P067A121F1_065.ab1    32 
  268  C BG262734Sn26P116G10P067A121R1_065.ab1   504 
  272    BG262734Sn26P116G10P067A121F1_065.ab1   236 
  564  C BG262734Sn26P116G10P067A121R1_065.ab1   208 
  568    BG262734Sn26P116G10P067A121F1_065.ab1   532 
  620  C BG262734Sn26P116G10P067A121R1_065.ab1   152 
  664    BG262734Sn26P116G10P067A121F1_065.ab1   628 
  672  C BG262734Sn26P116G10P067A121R1_065.ab1   100 
  680    BG262734Sn26P116G10P067A121F1_065.ab1   644 
  695  C BG262734Sn26P116G10P067A121R1_065.ab1    77 
  719    BG262734Sn26P116G10P067A121F1_065.ab1   683 
  735  C BG262734Sn26P116G10P067A121R1_065.ab1    38 
Contig length: old 771, new 772

Contig length: old 772, new 772
New start: 0