No. words: 1386; after pruning: 1360


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:732)  612  0.16 0.00 0.00  BG262734Sn27P116G10P067A121F1_080.ab1        1   622 (0)  C BG262734Sn27P116G10P067A121R1_080.ab1   (31)   733   112 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BG262734Sn27P116G10P067A121R1_080.ab1   764 
   35    BG262734Sn27P116G10P067A121F1_080.ab1     4 
   39  C BG262734Sn27P116G10P067A121R1_080.ab1   726 
   43    BG262734Sn27P116G10P067A121F1_080.ab1    12 
   47  C BG262734Sn27P116G10P067A121R1_080.ab1   718 
   51    BG262734Sn27P116G10P067A121F1_080.ab1    20 
   67  C BG262734Sn27P116G10P067A121R1_080.ab1   698 
   80    BG262734Sn27P116G10P067A121F1_080.ab1    49 
  176  C BG262734Sn27P116G10P067A121R1_080.ab1   589 
  180    BG262734Sn27P116G10P067A121F1_080.ab1   149 
  264  C BG262734Sn27P116G10P067A121R1_080.ab1   501 
  268    BG262734Sn27P116G10P067A121F1_080.ab1   237 
  408  C BG262734Sn27P116G10P067A121R1_080.ab1   357 
  420    BG262734Sn27P116G10P067A121F1_080.ab1   389 
  444  C BG262734Sn27P116G10P067A121R1_080.ab1   321 
  456    BG262734Sn27P116G10P067A121F1_080.ab1   425 
  540  C BG262734Sn27P116G10P067A121R1_080.ab1   225 
  548    BG262734Sn27P116G10P067A121F1_080.ab1   517 
  564  C BG262734Sn27P116G10P067A121R1_080.ab1   201 
  568    BG262734Sn27P116G10P067A121F1_080.ab1   537 
  572  C BG262734Sn27P116G10P067A121R1_080.ab1   193 
  576    BG262734Sn27P116G10P067A121F1_080.ab1   545 
  580  C BG262734Sn27P116G10P067A121R1_080.ab1   185 
Contig length: old 764, new 764

Contig length: old 764, new 764
New start: 0