No. words: 1406; after pruning: 1380


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.3 (1,1:728)  635  0.00 0.00 0.00  BG262734Sn30P116G10P067A121F1_072.ab1        1   643 (0)  C BG262734Sn30P116G10P067A121R1_072.ab1   (34)   729    87 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1  C BG262734Sn30P116G10P067A121R1_072.ab1   763 
   42    BG262734Sn30P116G10P067A121F1_072.ab1     8 
   66  C BG262734Sn30P116G10P067A121R1_072.ab1   698 
   70    BG262734Sn30P116G10P067A121F1_072.ab1    36 
  278  C BG262734Sn30P116G10P067A121R1_072.ab1   486 
  282    BG262734Sn30P116G10P067A121F1_072.ab1   248 
  446  C BG262734Sn30P116G10P067A121R1_072.ab1   318 
  450    BG262734Sn30P116G10P067A121F1_072.ab1   416 
  474  C BG262734Sn30P116G10P067A121R1_072.ab1   290 
  478    BG262734Sn30P116G10P067A121F1_072.ab1   444 
  506  C BG262734Sn30P116G10P067A121R1_072.ab1   258 
  514    BG262734Sn30P116G10P067A121F1_072.ab1   480 
  530  C BG262734Sn30P116G10P067A121R1_072.ab1   234 
  534    BG262734Sn30P116G10P067A121F1_072.ab1   500 
  574  C BG262734Sn30P116G10P067A121R1_072.ab1   190 
  586    BG262734Sn30P116G10P067A121F1_072.ab1   552 
  590  C BG262734Sn30P116G10P067A121R1_072.ab1   174 
Contig length: old 763, new 763

Contig length: old 763, new 763
New start: 0