No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:743)  572  0.00 0.17 0.00  BG262734Sn31P116G10P067A121F1_076.ab1        1   583 (0)  C BG262734Sn31P116G10P067A121R1_076.ab1   (27)   745   162 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C BG262734Sn31P116G10P067A121R1_076.ab1   772 
   39    BG262734Sn31P116G10P067A121F1_076.ab1    12 
  106  C BG262734Sn31P116G10P067A121R1_076.ab1   666 
  110    BG262734Sn31P116G10P067A121F1_076.ab1    83 
  270  C BG262734Sn31P116G10P067A121R1_076.ab1   502 
  282    BG262734Sn31P116G10P067A121F1_076.ab1   255 
  286  C BG262734Sn31P116G10P067A121R1_076.ab1   486 
  290    BG262734Sn31P116G10P067A121F1_076.ab1   263 
  294  C BG262734Sn31P116G10P067A121R1_076.ab1   478 
  298    BG262734Sn31P116G10P067A121F1_076.ab1   271 
  306  C BG262734Sn31P116G10P067A121R1_076.ab1   466 
  314    BG262734Sn31P116G10P067A121F1_076.ab1   287 
  434  C BG262734Sn31P116G10P067A121R1_076.ab1   338 
  438    BG262734Sn31P116G10P067A121F1_076.ab1   411 
  442  C BG262734Sn31P116G10P067A121R1_076.ab1   330 
  450    BG262734Sn31P116G10P067A121F1_076.ab1   423 
  570  C BG262734Sn31P116G10P067A121R1_076.ab1   202 
Contig length: old 772, new 771

Contig length: old 771, new 771
New start: 0