No. words: 1534; after pruning: 1508


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:848)  673  0.00 0.00 0.15  BG262734Ta11P116C10P067A121F1_005.ab1       85   769 (0)  C BG262734Ta11P116C10P067A121R1_005.ab1   (0)   765    82 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1    BG262734Ta11P116C10P067A121F1_005.ab1     1 
  533  C BG262734Ta11P116C10P067A121R1_005.ab1   318 
  537    BG262734Ta11P116C10P067A121F1_005.ab1   537 
  545  C BG262734Ta11P116C10P067A121R1_005.ab1   306 
  557    BG262734Ta11P116C10P067A121F1_005.ab1   557 
  565  C BG262734Ta11P116C10P067A121R1_005.ab1   286 
Contig length: old 849, new 850

Contig length: old 850, new 850
New start: 0