No. words: 1530; after pruning: 1504


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:841)  681  0.00 0.00 0.00  BG262734Ta13P116C10P067A121F1_003.ab1       71   758 (0)  C BG262734Ta13P116C10P067A121R1_003.ab1   (0)   772    85 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    BG262734Ta13P116C10P067A121F1_003.ab1     1 
  278  C BG262734Ta13P116C10P067A121R1_003.ab1   565 
  282    BG262734Ta13P116C10P067A121F1_003.ab1   282 
  366  C BG262734Ta13P116C10P067A121R1_003.ab1   477 
  370    BG262734Ta13P116C10P067A121F1_003.ab1   370 
  398  C BG262734Ta13P116C10P067A121R1_003.ab1   445 
  410    BG262734Ta13P116C10P067A121F1_003.ab1   410 
  430  C BG262734Ta13P116C10P067A121R1_003.ab1   413 
  438    BG262734Ta13P116C10P067A121F1_003.ab1   438 
  446  C BG262734Ta13P116C10P067A121R1_003.ab1   397 
  466    BG262734Ta13P116C10P067A121F1_003.ab1   466 
  494  C BG262734Ta13P116C10P067A121R1_003.ab1   349 
  506    BG262734Ta13P116C10P067A121F1_003.ab1   506 
  518  C BG262734Ta13P116C10P067A121R1_003.ab1   325 
  526    BG262734Ta13P116C10P067A121F1_003.ab1   526 
  558  C BG262734Ta13P116C10P067A121R1_003.ab1   285 
  574    BG262734Ta13P116C10P067A121F1_003.ab1   574 
  586  C BG262734Ta13P116C10P067A121R1_003.ab1   257 
Contig length: old 842, new 842

Contig length: old 842, new 842
New start: 0