No. words: 1462; after pruning: 1436


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:734)  676  0.29 0.00 0.00  BG262734Ta13P116G10P067A121F1_062.ab1        1   690 (0)  C BG262734Ta13P116G10P067A121R1_062.ab1   (37)   735    46 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1  C BG262734Ta13P116G10P067A121R1_062.ab1   772 
   41    BG262734Ta13P116G10P067A121F1_062.ab1     4 
  289  C BG262734Ta13P116G10P067A121R1_062.ab1   484 
  293    BG262734Ta13P116G10P067A121F1_062.ab1   256 
  453  C BG262734Ta13P116G10P067A121R1_062.ab1   320 
  457    BG262734Ta13P116G10P067A121F1_062.ab1   420 
  569  C BG262734Ta13P116G10P067A121R1_062.ab1   204 
  573    BG262734Ta13P116G10P067A121F1_062.ab1   536 
  589  C BG262734Ta13P116G10P067A121R1_062.ab1   184 
  609    BG262734Ta13P116G10P067A121F1_062.ab1   572 
  613  C BG262734Ta13P116G10P067A121R1_062.ab1   160 
Contig length: old 772, new 772

Contig length: old 772, new 772
New start: 0