No. words: 1548; after pruning: 1508


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:852)  686  0.14 0.00 0.00  BG262734Ta17P116C10P067A121F1_031.ab1       87   781 (0)  C BG262734Ta17P116C10P067A121R1_031.ab1   (0)   767    73 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    BG262734Ta17P116C10P067A121F1_031.ab1     1 
  415  C BG262734Ta17P116C10P067A121R1_031.ab1   439 
  427    BG262734Ta17P116C10P067A121F1_031.ab1   427 
  443  C BG262734Ta17P116C10P067A121R1_031.ab1   411 
  455    BG262734Ta17P116C10P067A121F1_031.ab1   455 
  467  C BG262734Ta17P116C10P067A121R1_031.ab1   387 
  491    BG262734Ta17P116C10P067A121F1_031.ab1   491 
  507  C BG262734Ta17P116C10P067A121R1_031.ab1   347 
  563    BG262734Ta17P116C10P067A121F1_031.ab1   563 
  567  C BG262734Ta17P116C10P067A121R1_031.ab1   287 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0