No. words: 1435; after pruning: 1409


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 13.1 (1,1:736)  649  0.00 0.00 0.00  BG262734Ta20P116G10P067A121F1_071.ab1        1   657 (4)  C BG262734Ta20P116G10P067A121R1_071.ab1   (37)   737    81 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C BG262734Ta20P116G10P067A121R1_071.ab1   774 
   45    BG262734Ta20P116G10P067A121F1_071.ab1     8 
  281  C BG262734Ta20P116G10P067A121R1_071.ab1   494 
  285    BG262734Ta20P116G10P067A121F1_071.ab1   248 
  449  C BG262734Ta20P116G10P067A121R1_071.ab1   326 
  453    BG262734Ta20P116G10P067A121F1_071.ab1   416 
  509  C BG262734Ta20P116G10P067A121R1_071.ab1   266 
  513    BG262734Ta20P116G10P067A121F1_071.ab1   476 
  557  C BG262734Ta20P116G10P067A121R1_071.ab1   218 
  565    BG262734Ta20P116G10P067A121F1_071.ab1   528 
  577  C BG262734Ta20P116G10P067A121R1_071.ab1   198 
  581    BG262734Ta20P116G10P067A121F1_071.ab1   544 
  589  C BG262734Ta20P116G10P067A121R1_071.ab1   186 
  601    BG262734Ta20P116G10P067A121F1_071.ab1   564 
  609  C BG262734Ta20P116G10P067A121R1_071.ab1   166 
Contig length: old 774, new 774

Contig length: old 774, new 774
New start: 0