No. words: 1583; after pruning: 1557


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:854)  693  1.24 0.00 0.00  BG262734Ta21P116C10P067A121F1_027.ab1       72   799 (0)  C BG262734Ta21P116C10P067A121R1_027.ab1   (0)   784    57 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1    BG262734Ta21P116C10P067A121F1_027.ab1     1 
  690  C BG262734Ta21P116C10P067A121R1_027.ab1   166 
  698    BG262734Ta21P116C10P067A121F1_027.ab1   698 
  710  C BG262734Ta21P116C10P067A121R1_027.ab1   146 
  714    BG262734Ta21P116C10P067A121F1_027.ab1   714 
  718  C BG262734Ta21P116C10P067A121R1_027.ab1   138 
  722    BG262734Ta21P116C10P067A121F1_027.ab1   722 
  738  C BG262734Ta21P116C10P067A121R1_027.ab1   118 
  746    BG262734Ta21P116C10P067A121F1_027.ab1   746 
  772  C BG262734Ta21P116C10P067A121R1_027.ab1    84 
Contig length: old 855, new 855

Contig length: old 855, new 855
New start: 0