No. words: 1565; after pruning: 1525


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.5 (1,1:855)  693  0.42 0.00 0.00  BG262734Td03P116C10P067A121F1_013.ab1       75   783 (0)  C BG262734Td03P116C10P067A121R1_013.ab1   (0)   782    74 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1    BG262734Td03P116C10P067A121F1_013.ab1     1 
  468  C BG262734Td03P116C10P067A121R1_013.ab1   389 
  476    BG262734Td03P116C10P067A121F1_013.ab1   476 
  484  C BG262734Td03P116C10P067A121R1_013.ab1   373 
  492    BG262734Td03P116C10P067A121F1_013.ab1   492 
  500  C BG262734Td03P116C10P067A121R1_013.ab1   357 
  520    BG262734Td03P116C10P067A121F1_013.ab1   520 
  528  C BG262734Td03P116C10P067A121R1_013.ab1   329 
Contig length: old 856, new 856

Contig length: old 856, new 856
New start: 0