No. words: 1576; after pruning: 1550


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:855)  712  0.00 0.00 0.00  BG262734Td06P116C10P067A121F1_012.ab1       70   789 (0)  C BG262734Td06P116C10P067A121R1_012.ab1   (0)   787    68 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    BG262734Td06P116C10P067A121F1_012.ab1     1 
  517  C BG262734Td06P116C10P067A121R1_012.ab1   340 
  521    BG262734Td06P116C10P067A121F1_012.ab1   521 
  533  C BG262734Td06P116C10P067A121R1_012.ab1   324 
  541    BG262734Td06P116C10P067A121F1_012.ab1   541 
  549  C BG262734Td06P116C10P067A121R1_012.ab1   308 
  565    BG262734Td06P116C10P067A121F1_012.ab1   565 
  573  C BG262734Td06P116C10P067A121R1_012.ab1   284 
  589    BG262734Td06P116C10P067A121F1_012.ab1   589 
  593  C BG262734Td06P116C10P067A121R1_012.ab1   264 
  597    BG262734Td06P116C10P067A121F1_012.ab1   597 
  601  C BG262734Td06P116C10P067A121R1_012.ab1   256 
Contig length: old 856, new 856

Contig length: old 856, new 856
New start: 0