No. words: 1554; after pruning: 1528


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.6 (1,1:842)  694  0.00 0.00 0.28  BG262734Td08P116C10P067A121F1_010.ab1       66   777 (0)  C BG262734Td08P116C10P067A121R1_010.ab1   (0)   777    68 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1    BG262734Td08P116C10P067A121F1_010.ab1     1 
   73  C BG262734Td08P116C10P067A121R1_010.ab1   770 
   77    BG262734Td08P116C10P067A121F1_010.ab1    77 
  178  C BG262734Td08P116C10P067A121R1_010.ab1   667 
  182    BG262734Td08P116C10P067A121F1_010.ab1   182 
  278  C BG262734Td08P116C10P067A121R1_010.ab1   567 
  286    BG262734Td08P116C10P067A121F1_010.ab1   286 
  302  C BG262734Td08P116C10P067A121R1_010.ab1   543 
  322    BG262734Td08P116C10P067A121F1_010.ab1   322 
  326  C BG262734Td08P116C10P067A121R1_010.ab1   519 
  330    BG262734Td08P116C10P067A121F1_010.ab1   330 
  334  C BG262734Td08P116C10P067A121R1_010.ab1   511 
  338    BG262734Td08P116C10P067A121F1_010.ab1   338 
  346  C BG262734Td08P116C10P067A121R1_010.ab1   499 
  362    BG262734Td08P116C10P067A121F1_010.ab1   362 
  370  C BG262734Td08P116C10P067A121R1_010.ab1   475 
  394    BG262734Td08P116C10P067A121F1_010.ab1   394 
  402  C BG262734Td08P116C10P067A121R1_010.ab1   443 
  586    BG262734Td08P116C10P067A121F1_010.ab1   586 
  590  C BG262734Td08P116C10P067A121R1_010.ab1   255 
Contig length: old 843, new 844

Contig length: old 844, new 844
New start: 0