No. words: 1566; after pruning: 1540


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:853)  704  0.00 0.00 0.00  BG262734Td10P116C10P067A121F1_008.ab1       73   784 (0)  C BG262734Td10P116C10P067A121R1_008.ab1   (0)   782    71 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1    BG262734Td10P116C10P067A121F1_008.ab1     1 
  484  C BG262734Td10P116C10P067A121R1_008.ab1   371 
  492    BG262734Td10P116C10P067A121F1_008.ab1   492 
  504  C BG262734Td10P116C10P067A121R1_008.ab1   351 
  508    BG262734Td10P116C10P067A121F1_008.ab1   508 
  548  C BG262734Td10P116C10P067A121R1_008.ab1   307 
  552    BG262734Td10P116C10P067A121F1_008.ab1   552 
  576  C BG262734Td10P116C10P067A121R1_008.ab1   279 
  588    BG262734Td10P116C10P067A121F1_008.ab1   588 
  596  C BG262734Td10P116C10P067A121R1_008.ab1   259 
Contig length: old 854, new 854

Contig length: old 854, new 854
New start: 0