No. words: 1103; after pruning: 1077


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:934)  167  0.00 0.00 0.00  BG262734Tu02P067A06P067A121F1_054.ab1      347   514 (0)  C BG262734Tu02P067A06P067A121R1_054.ab1   (0)   589   422 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1    BG262734Tu02P067A06P067A121F1_054.ab1     1 
  410  C BG262734Tu02P067A06P067A121R1_054.ab1   526 
  414    BG262734Tu02P067A06P067A121F1_054.ab1   414 
  438  C BG262734Tu02P067A06P067A121R1_054.ab1   498 
  450    BG262734Tu02P067A06P067A121F1_054.ab1   450 
  470  C BG262734Tu02P067A06P067A121R1_054.ab1   466 
  490    BG262734Tu02P067A06P067A121F1_054.ab1   490 
  494  C BG262734Tu02P067A06P067A121R1_054.ab1   442 
Contig length: old 935, new 935

Contig length: old 935, new 935
New start: 0