No. words: 1138; after pruning: 1112


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.8 (1,1:786)  341  0.00 0.00 0.00  BG262775As02P067B06P067B121F1_069.ab1      245   595 (0)  C BG262775As02P067B06P067B121R1_069.ab1   (0)   543   193 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1    BG262775As02P067B06P067B121F1_069.ab1     1 
  448  C BG262775As02P067B06P067B121R1_069.ab1   340 
  460    BG262775As02P067B06P067B121F1_069.ab1   460 
  464  C BG262775As02P067B06P067B121R1_069.ab1   324 
Contig length: old 787, new 787

Contig length: old 787, new 787
New start: 0