No. words: 840; after pruning: 814


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.6 (1,1:810)   29  0.00 0.00 0.00  BG262775At01P067B06P067B121F1_067.ab1      247   275 (0)  C BG262775At01P067B06P067B121R1_067.ab1   (0)   565   537 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  16 nodes

 10 str. conn. components

Path
    1    BG262775At01P067B06P067B121F1_067.ab1     1 
  262  C BG262775At01P067B06P067B121R1_067.ab1   550 
  266    BG262775At01P067B06P067B121F1_067.ab1   266 
  270  C BG262775At01P067B06P067B121R1_067.ab1   542 
Contig length: old 811, new 811

Contig length: old 811, new 811
New start: 0