No. words: 972; after pruning: 946


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.6 (1,1:848)  117  0.81 0.00 0.00  BG262775Ld09P067B06P067B121F1_021.ab1      240   362 (0)  C BG262775Ld09P067B06P067B121R1_021.ab1   (0)   610   488 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  60 nodes

 32 str. conn. components

Path
    1    BG262775Ld09P067B06P067B121F1_021.ab1     1 
  325  C BG262775Ld09P067B06P067B121R1_021.ab1   525 
  349    BG262775Ld09P067B06P067B121F1_021.ab1   349 
  357  C BG262775Ld09P067B06P067B121R1_021.ab1   493 
Contig length: old 849, new 849

Contig length: old 849, new 849
New start: 0