No. words: 923; after pruning: 897


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.9 (1,1:872)   47  2.00 0.00 0.00  BG262775Ld10P067B06P067B121F1_019.ab1      379   428 (0)  C BG262775Ld10P067B06P067B121R1_019.ab1   (0)   495   446 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  24 nodes

 14 str. conn. components

Path
    1    BG262775Ld10P067B06P067B121F1_019.ab1     1 
  383  C BG262775Ld10P067B06P067B121R1_019.ab1   491 
  391    BG262775Ld10P067B06P067B121F1_019.ab1   391 
  415  C BG262775Ld10P067B06P067B121R1_019.ab1   459 
  419    BG262775Ld10P067B06P067B121F1_019.ab1   419 
  423  C BG262775Ld10P067B06P067B121R1_019.ab1   451 
Contig length: old 873, new 873

Contig length: old 873, new 873
New start: 0