No. words: 1099; after pruning: 1073


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.8 (1,1:920)  168  0.56 0.00 0.00  BG262775Tu01P067B06P067B121F1_075.ab1      354   531 (0)  C BG262775Tu01P067B06P067B121R1_075.ab1   (0)   568   391 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1    BG262775Tu01P067B06P067B121F1_075.ab1     1 
  357  C BG262775Tu01P067B06P067B121R1_075.ab1   565 
  361    BG262775Tu01P067B06P067B121F1_075.ab1   361 
  477  C BG262775Tu01P067B06P067B121R1_075.ab1   445 
Contig length: old 921, new 921

Contig length: old 921, new 921
New start: 0