No. words: 1766; after pruning: 1740


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 17.3 (1,1:880)  806  0.00 0.12 0.12  BG263754Ld02P114H03P114H061F1_060.ab1        3   845 (6)  C BG263754Ld02P114H03P114H061R1_060.ab1   (36)   879    37 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  416 nodes

 210 str. conn. components

Path
    1  C BG263754Ld02P114H03P114H061R1_060.ab1   915 
   49    BG263754Ld02P114H03P114H061F1_060.ab1    14 
  234  C BG263754Ld02P114H03P114H061R1_060.ab1   683 
  370    BG263754Ld02P114H03P114H061F1_060.ab1   335 
  458  C BG263754Ld02P114H03P114H061R1_060.ab1   459 
  510    BG263754Ld02P114H03P114H061F1_060.ab1   475 
  562  C BG263754Ld02P114H03P114H061R1_060.ab1   355 
  682    BG263754Ld02P114H03P114H061F1_060.ab1   647 
  690  C BG263754Ld02P114H03P114H061R1_060.ab1   227 
  706    BG263754Ld02P114H03P114H061F1_060.ab1   671 
  738  C BG263754Ld02P114H03P114H061R1_060.ab1   179 
Contig length: old 915, new 916

Contig length: old 916, new 916
New start: 0