No. words: 1077; after pruning: 1051


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:481)  468  0.00 0.00 0.21  BG263780Tu02P081E02P081E081F1_056.ab1        1   482 (54)  C BG263780Tu02P081E02P081E081R1_056.ab1   (60)   481     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C BG263780Tu02P081E02P081E081R1_056.ab1   541 
  124    BG263780Tu02P081E02P081E081F1_056.ab1    64 
  136  C BG263780Tu02P081E02P081E081R1_056.ab1   406 
  220    BG263780Tu02P081E02P081E081F1_056.ab1   160 
Contig length: old 595, new 596

Contig length: old 596, new 596
New start: 0