No. words: 1237; after pruning: 1211


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:561)  539  0.18 0.00 0.00  BG274556Ta16P052D11P027C101F2_034.ab1        1   562 (57)  C BG274556Ta16P052D11P027C101R2_034.ab1   (56)   562     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1  C BG274556Ta16P052D11P027C101R2_034.ab1   618 
  244    BG274556Ta16P052D11P027C101F2_034.ab1   188 
Contig length: old 675, new 675

Contig length: old 675, new 675
New start: 0