No. words: 1268; after pruning: 1242


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:591)  552  0.34 0.34 0.17  BG274556Td08P052D11P027C101F1_074.ab1        1   592 (39)  C BG274556Td08P052D11P027C101R1_074.ab1   (44)   593     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BG274556Td08P052D11P027C101R1_074.ab1   637 
   62    BG274556Td08P052D11P027C101F1_074.ab1    16 
   66  C BG274556Td08P052D11P027C101R1_074.ab1   572 
   74    BG274556Td08P052D11P027C101F1_074.ab1    28 
   90  C BG274556Td08P052D11P027C101R1_074.ab1   548 
  102    BG274556Td08P052D11P027C101F1_074.ab1    56 
  118  C BG274556Td08P052D11P027C101R1_074.ab1   520 
  122    BG274556Td08P052D11P027C101F1_074.ab1    76 
  130  C BG274556Td08P052D11P027C101R1_074.ab1   508 
  154    BG274556Td08P052D11P027C101F1_074.ab1   108 
  186  C BG274556Td08P052D11P027C101R1_074.ab1   452 
  190    BG274556Td08P052D11P027C101F1_074.ab1   144 
  226  C BG274556Td08P052D11P027C101R1_074.ab1   412 
  230    BG274556Td08P052D11P027C101F1_074.ab1   184 
  342  C BG274556Td08P052D11P027C101R1_074.ab1   296 
  350    BG274556Td08P052D11P027C101F1_074.ab1   304 
  354  C BG274556Td08P052D11P027C101R1_074.ab1   284 
  374    BG274556Td08P052D11P027C101F1_074.ab1   328 
  434  C BG274556Td08P052D11P027C101R1_074.ab1   204 
  442    BG274556Td08P052D11P027C101F1_074.ab1   396 
  486  C BG274556Td08P052D11P027C101R1_074.ab1   152 
  490    BG274556Td08P052D11P027C101F1_074.ab1   444 
  494  C BG274556Td08P052D11P027C101R1_074.ab1   144 
  506    BG274556Td08P052D11P027C101F1_074.ab1   460 
  530  C BG274556Td08P052D11P027C101R1_074.ab1   108 
  534    BG274556Td08P052D11P027C101F1_074.ab1   488 
Contig length: old 676, new 677

Contig length: old 677, new 677
New start: 0