No. words: 1274; after pruning: 1248


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:593)  564  0.00 0.17 0.17  BG274556Td10P052D11P027C101F1_072.ab1        1   594 (39)  C BG274556Td10P052D11P027C101R1_072.ab1   (47)   594     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BG274556Td10P052D11P027C101R1_072.ab1   641 
   60    BG274556Td10P052D11P027C101F1_072.ab1    12 
   92  C BG274556Td10P052D11P027C101R1_072.ab1   550 
  100    BG274556Td10P052D11P027C101F1_072.ab1    52 
  120  C BG274556Td10P052D11P027C101R1_072.ab1   522 
  124    BG274556Td10P052D11P027C101F1_072.ab1    76 
  132  C BG274556Td10P052D11P027C101R1_072.ab1   510 
  136    BG274556Td10P052D11P027C101F1_072.ab1    88 
  144  C BG274556Td10P052D11P027C101R1_072.ab1   498 
  148    BG274556Td10P052D11P027C101F1_072.ab1   100 
  192  C BG274556Td10P052D11P027C101R1_072.ab1   450 
  196    BG274556Td10P052D11P027C101F1_072.ab1   148 
  240  C BG274556Td10P052D11P027C101R1_072.ab1   402 
  244    BG274556Td10P052D11P027C101F1_072.ab1   196 
  280  C BG274556Td10P052D11P027C101R1_072.ab1   362 
  284    BG274556Td10P052D11P027C101F1_072.ab1   236 
  360  C BG274556Td10P052D11P027C101R1_072.ab1   282 
  376    BG274556Td10P052D11P027C101F1_072.ab1   328 
  436  C BG274556Td10P052D11P027C101R1_072.ab1   206 
  440    BG274556Td10P052D11P027C101F1_072.ab1   392 
  488  C BG274556Td10P052D11P027C101R1_072.ab1   154 
  496    BG274556Td10P052D11P027C101F1_072.ab1   448 
  504  C BG274556Td10P052D11P027C101R1_072.ab1   138 
  512    BG274556Td10P052D11P027C101F1_072.ab1   464 
  532  C BG274556Td10P052D11P027C101R1_072.ab1   110 
  536    BG274556Td10P052D11P027C101F1_072.ab1   488 
  580  C BG274556Td10P052D11P027C101R1_072.ab1    62 
  584    BG274556Td10P052D11P027C101F1_072.ab1   536 
  600  C BG274556Td10P052D11P027C101R1_072.ab1    42 
  612    BG274556Td10P052D11P027C101F1_072.ab1   564 
  616  C BG274556Td10P052D11P027C101R1_072.ab1    26 
  620    BG274556Td10P052D11P027C101F1_072.ab1   572 
  632  C BG274556Td10P052D11P027C101R1_072.ab1    11 
  636    BG274556Td10P052D11P027C101F1_072.ab1   588 
Contig length: old 680, new 681

Contig length: old 681, new 681
New start: 0