No. words: 1059; after pruning: 1033


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:355)  352  0.00 0.28 0.00  BG275108Ld02P027E04P027E101F1_017.ab1        1   356 (182)  C BG275108Ld02P027E04P027E101R1_017.ab1   (164)   357     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  174 nodes

 89 str. conn. components

Path
    1  C BG275108Ld02P027E04P027E101R1_017.ab1   521 
  187    BG275108Ld02P027E04P027E101F1_017.ab1    22 
  191  C BG275108Ld02P027E04P027E101R1_017.ab1   331 
  363    BG275108Ld02P027E04P027E101F1_017.ab1   198 
  371  C BG275108Ld02P027E04P027E101R1_017.ab1   151 
  403    BG275108Ld02P027E04P027E101F1_017.ab1   238 
  407  C BG275108Ld02P027E04P027E101R1_017.ab1   115 
  427    BG275108Ld02P027E04P027E101F1_017.ab1   262 
  435  C BG275108Ld02P027E04P027E101R1_017.ab1    87 
  447    BG275108Ld02P027E04P027E101F1_017.ab1   282 
  463  C BG275108Ld02P027E04P027E101R1_017.ab1    59 
  467    BG275108Ld02P027E04P027E101F1_017.ab1   302 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0