No. words: 1059; after pruning: 1033


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.9 (1,1:354)  355  0.00 0.00 0.00  BG275108Ld07P027E04P027E101F1_024.ab1        1   355 (186)  C BG275108Ld07P027E04P027E101R1_024.ab1   (163)   355     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  178 nodes

 91 str. conn. components

Path
    1  C BG275108Ld07P027E04P027E101R1_024.ab1   518 
  187    BG275108Ld07P027E04P027E101F1_024.ab1    24 
  191  C BG275108Ld07P027E04P027E101R1_024.ab1   328 
  367    BG275108Ld07P027E04P027E101F1_024.ab1   204 
  407  C BG275108Ld07P027E04P027E101R1_024.ab1   112 
  427    BG275108Ld07P027E04P027E101F1_024.ab1   264 
  447  C BG275108Ld07P027E04P027E101R1_024.ab1    72 
  471    BG275108Ld07P027E04P027E101F1_024.ab1   308 
Contig length: old 704, new 704

Contig length: old 704, new 704
New start: 0