No. words: 990; after pruning: 964


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 7.5 (1,1:361)  360  0.00 0.00 0.00  BG275108Ld08P027E04P027E101F1_022.ab1        1   360 (107)  C BG275108Ld08P027E04P027E101R1_022.ab1   (161)   362     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C BG275108Ld08P027E04P027E101R1_022.ab1   523 
  385    BG275108Ld08P027E04P027E101F1_022.ab1   224 
  389  C BG275108Ld08P027E04P027E101R1_022.ab1   135 
  497    BG275108Ld08P027E04P027E101F1_022.ab1   336 
  501  C BG275108Ld08P027E04P027E101R1_022.ab1    23 
  517    BG275108Ld08P027E04P027E101F1_022.ab1   356 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0