No. words: 1226; after pruning: 1200


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.4 (1,1:586)  565  0.00 0.00 0.00  BG313152Tu01P003E05E111F1_09.ab1        1   585 (27)  C BG313152Tu01P003E05E111R1_09.ab1   (27)   587     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BG313152Tu01P003E05E111R1_09.ab1   614 
   35    BG313152Tu01P003E05E111F1_09.ab1     8 
  247  C BG313152Tu01P003E05E111R1_09.ab1   368 
  255    BG313152Tu01P003E05E111F1_09.ab1   228 
  475  C BG313152Tu01P003E05E111R1_09.ab1   140 
  487    BG313152Tu01P003E05E111F1_09.ab1   460 
  491  C BG313152Tu01P003E05E111R1_09.ab1   124 
  499    BG313152Tu01P003E05E111F1_09.ab1   472 
  503  C BG313152Tu01P003E05E111R1_09.ab1   112 
  603    BG313152Tu01P003E05E111F1_09.ab1   576 
Contig length: old 639, new 639

Contig length: old 639, new 639
New start: 0