No. words: 1074; after pruning: 1048


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:487)  474  0.00 0.20 0.00  BG313722Td08P088C11P078H121F1_074.ab1        1   488 (49)  C BG313722Td08P088C11P078H121R1_074.ab1   (48)   489     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BG313722Td08P088C11P078H121R1_074.ab1   537 
  116    BG313722Td08P088C11P078H121F1_074.ab1    67 
  124  C BG313722Td08P088C11P078H121R1_074.ab1   414 
  128    BG313722Td08P088C11P078H121F1_074.ab1    79 
  132  C BG313722Td08P088C11P078H121R1_074.ab1   406 
  312    BG313722Td08P088C11P078H121F1_074.ab1   263 
Contig length: old 586, new 586

Contig length: old 586, new 586
New start: 0