No. words: 1184; after pruning: 1158


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.8 (1,1:430)  417  0.00 0.00 0.23  BG604453Ld01P027G04P027G101F1_023.ab1        1   430 (143)  C BG604453Ld01P027G04P027G101R1_023.ab1   (181)   430     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C BG604453Ld01P027G04P027G101R1_023.ab1   611 
  473    BG604453Ld01P027G04P027G101F1_023.ab1   292 
  481  C BG604453Ld01P027G04P027G101R1_023.ab1   131 
  509    BG604453Ld01P027G04P027G101F1_023.ab1   328 
  521  C BG604453Ld01P027G04P027G101R1_023.ab1    91 
  529    BG604453Ld01P027G04P027G101F1_023.ab1   348 
  565  C BG604453Ld01P027G04P027G101R1_023.ab1    47 
  569    BG604453Ld01P027G04P027G101F1_023.ab1   388 
  577  C BG604453Ld01P027G04P027G101R1_023.ab1    35 
  585    BG604453Ld01P027G04P027G101F1_023.ab1   404 
  589  C BG604453Ld01P027G04P027G101R1_023.ab1    23 
  593    BG604453Ld01P027G04P027G101F1_023.ab1   412 
Contig length: old 753, new 754

Contig length: old 754, new 754
New start: 0