No. words: 1191; after pruning: 1165


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 7.0 (1,1:435)  398  1.62 0.00 0.23  BG604453Ld02P027G04P027G101F1_021.ab1        6   436 (144)  C BG604453Ld02P027G04P027G101R1_021.ab1   (181)   430     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BG604453Ld02P027G04P027G101R1_021.ab1   611 
  417    BG604453Ld02P027G04P027G101F1_021.ab1   241 
  421  C BG604453Ld02P027G04P027G101R1_021.ab1   191 
  465    BG604453Ld02P027G04P027G101F1_021.ab1   289 
  473  C BG604453Ld02P027G04P027G101R1_021.ab1   139 
  477    BG604453Ld02P027G04P027G101F1_021.ab1   301 
  489  C BG604453Ld02P027G04P027G101R1_021.ab1   123 
  497    BG604453Ld02P027G04P027G101F1_021.ab1   321 
Contig length: old 755, new 756

Contig length: old 756, new 756
New start: 0