No. words: 1186; after pruning: 1160


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:419)  412  0.00 0.00 0.00  BG604453Ld03P027G04P027G101F1_019.ab1        1   420 (166)  C BG604453Ld03P027G04P027G101R1_019.ab1   (180)   420     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C BG604453Ld03P027G04P027G101R1_019.ab1   600 
  304    BG604453Ld03P027G04P027G101F1_019.ab1   124 
  308  C BG604453Ld03P027G04P027G101R1_019.ab1   293 
  512    BG604453Ld03P027G04P027G101F1_019.ab1   332 
  540  C BG604453Ld03P027G04P027G101R1_019.ab1    61 
  548    BG604453Ld03P027G04P027G101F1_019.ab1   368 
  580  C BG604453Ld03P027G04P027G101R1_019.ab1    21 
  584    BG604453Ld03P027G04P027G101F1_019.ab1   404 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0