No. words: 1187; after pruning: 1161


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:429)  418  0.00 0.23 0.00  BG604453Ld05P027G04P027G101F1_032.ab1        1   430 (157)  C BG604453Ld05P027G04P027G101R1_032.ab1   (169)   431     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1  C BG604453Ld05P027G04P027G101R1_032.ab1   600 
  303    BG604453Ld05P027G04P027G101F1_032.ab1   133 
  311  C BG604453Ld05P027G04P027G101R1_032.ab1   290 
  475    BG604453Ld05P027G04P027G101F1_032.ab1   305 
  499  C BG604453Ld05P027G04P027G101R1_032.ab1   102 
  511    BG604453Ld05P027G04P027G101F1_032.ab1   341 
  523  C BG604453Ld05P027G04P027G101R1_032.ab1    78 
  539    BG604453Ld05P027G04P027G101F1_032.ab1   369 
  559  C BG604453Ld05P027G04P027G101R1_032.ab1    42 
  563    BG604453Ld05P027G04P027G101F1_032.ab1   393 
  579  C BG604453Ld05P027G04P027G101R1_032.ab1    22 
  583    BG604453Ld05P027G04P027G101F1_032.ab1   413 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0