No. words: 1171; after pruning: 1145


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:413)  406  0.00 0.00 0.00  BG604453Ld06P027G04P027G101F1_030.ab1        1   414 (157)  C BG604453Ld06P027G04P027G101R1_030.ab1   (186)   414     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BG604453Ld06P027G04P027G101R1_030.ab1   600 
  414    BG604453Ld06P027G04P027G101F1_030.ab1   228 
  422  C BG604453Ld06P027G04P027G101R1_030.ab1   179 
  478    BG604453Ld06P027G04P027G101F1_030.ab1   292 
  482  C BG604453Ld06P027G04P027G101R1_030.ab1   119 
  510    BG604453Ld06P027G04P027G101F1_030.ab1   324 
  534  C BG604453Ld06P027G04P027G101R1_030.ab1    67 
  542    BG604453Ld06P027G04P027G101F1_030.ab1   356 
  558  C BG604453Ld06P027G04P027G101R1_030.ab1    43 
  570    BG604453Ld06P027G04P027G101F1_030.ab1   384 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0