No. words: 1188; after pruning: 1162


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:437)  431  0.00 0.00 0.00  BG604453Ld07P027G04P027G101F1_028.ab1        1   438 (140)  C BG604453Ld07P027G04P027G101R1_028.ab1   (172)   438     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BG604453Ld07P027G04P027G101R1_028.ab1   610 
  300    BG604453Ld07P027G04P027G101F1_028.ab1   128 
  308  C BG604453Ld07P027G04P027G101R1_028.ab1   303 
  508    BG604453Ld07P027G04P027G101F1_028.ab1   336 
  524  C BG604453Ld07P027G04P027G101R1_028.ab1    87 
  528    BG604453Ld07P027G04P027G101F1_028.ab1   356 
  536  C BG604453Ld07P027G04P027G101R1_028.ab1    75 
  544    BG604453Ld07P027G04P027G101F1_028.ab1   372 
Contig length: old 750, new 750

Contig length: old 750, new 750
New start: 0