No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.1 (1,1:439)  432  0.00 0.00 0.00  BG604453Ld08P027G04P027G101F1_026.ab1        1   439 (141)  C BG604453Ld08P027G04P027G101R1_026.ab1   (172)   440     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  222 nodes

 113 str. conn. components

Path
    1  C BG604453Ld08P027G04P027G101R1_026.ab1   612 
  476    BG604453Ld08P027G04P027G101F1_026.ab1   304 
  480  C BG604453Ld08P027G04P027G101R1_026.ab1   133 
  508    BG604453Ld08P027G04P027G101F1_026.ab1   336 
  524  C BG604453Ld08P027G04P027G101R1_026.ab1    89 
  528    BG604453Ld08P027G04P027G101F1_026.ab1   356 
  580  C BG604453Ld08P027G04P027G101R1_026.ab1    33 
  584    BG604453Ld08P027G04P027G101F1_026.ab1   412 
Contig length: old 752, new 752

Contig length: old 752, new 752
New start: 0