No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 7.8 (1,1:434)  421  0.00 0.00 0.00  BG604453Ld09P027G04P027G101F1_024.ab1        6   435 (145)  C BG604453Ld09P027G04P027G101R1_024.ab1   (182)   430     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  216 nodes

 110 str. conn. components

Path
    1  C BG604453Ld09P027G04P027G101R1_024.ab1   612 
  478    BG604453Ld09P027G04P027G101F1_024.ab1   301 
  482  C BG604453Ld09P027G04P027G101R1_024.ab1   131 
  514    BG604453Ld09P027G04P027G101F1_024.ab1   337 
  530  C BG604453Ld09P027G04P027G101R1_024.ab1    83 
  534    BG604453Ld09P027G04P027G101F1_024.ab1   357 
  542  C BG604453Ld09P027G04P027G101R1_024.ab1    71 
  550    BG604453Ld09P027G04P027G101F1_024.ab1   373 
  582  C BG604453Ld09P027G04P027G101R1_024.ab1    31 
  586    BG604453Ld09P027G04P027G101F1_024.ab1   409 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0