No. words: 1210; after pruning: 1184


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.4 (1,1:452)  441  0.00 0.22 0.00  BG604453Ld10P027G04P027G101F1_022.ab1        1   452 (172)  C BG604453Ld10P027G04P027G101R1_022.ab1   (132)   454     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  226 nodes

 115 str. conn. components

Path
    1  C BG604453Ld10P027G04P027G101R1_022.ab1   586 
  449    BG604453Ld10P027G04P027G101F1_022.ab1   316 
  457  C BG604453Ld10P027G04P027G101R1_022.ab1   130 
  485    BG604453Ld10P027G04P027G101F1_022.ab1   352 
  509  C BG604453Ld10P027G04P027G101R1_022.ab1    78 
  525    BG604453Ld10P027G04P027G101F1_022.ab1   392 
Contig length: old 757, new 757

Contig length: old 757, new 757
New start: 0