No. words: 276; after pruning: 250


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -1.1 -1.1 (1,1:79)   52  6.49 1.30 1.30  BG604453Ta12P059G08P027G101F1_042.ab1        4    80 (66)  C BG604453Ta12P059G08P027G101R1_042.ab1   (53)    77     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.1       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  20 nodes

 12 str. conn. components

Path
    1  C BG604453Ta12P059G08P027G101R1_042.ab1   130 
   65    BG604453Ta12P059G08P027G101F1_042.ab1    15 
   82  C BG604453Ta12P059G08P027G101R1_042.ab1    48 
  105    BG604453Ta12P059G08P027G101F1_042.ab1    55 
  109  C BG604453Ta12P059G08P027G101R1_042.ab1    21 
  123    BG604453Ta12P059G08P027G101F1_042.ab1    74 
Contig length: old 196, new 195

Contig length: old 195, new 197
New start: 0 
I Change at: 78; seg lengths: entry 3, contig 2
I Change at: 123; seg lengths: entry 1, contig 0