No. words: 276; after pruning: 250


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.9 -0.9 (1,1:78)   57  5.06 1.27 1.27  BG604453Td08P059G08P027G101F1_033.ab1        1    79 (65)  C BG604453Td08P059G08P027G101R1_033.ab1   (53)    79     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.9       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  22 nodes

 13 str. conn. components

Path
    1  C BG604453Td08P059G08P027G101R1_033.ab1   132 
   65    BG604453Td08P059G08P027G101F1_033.ab1    12 
   73  C BG604453Td08P059G08P027G101R1_033.ab1    60 
   82    BG604453Td08P059G08P027G101F1_033.ab1    28 
   86  C BG604453Td08P059G08P027G101R1_033.ab1    47 
  106    BG604453Td08P059G08P027G101F1_033.ab1    52 
  110  C BG604453Td08P059G08P027G101R1_033.ab1    23 
  124    BG604453Td08P059G08P027G101F1_033.ab1    71 
Contig length: old 197, new 197

Contig length: old 197, new 198
New start: 0 
I Change at: 123; seg lengths: entry 1, contig 0