No. words: 1206; after pruning: 1180


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.0 (1,1:471)  454  0.00 0.43 0.00  BG605323Ln02P003B01B071F1_04.ab1        3   471 (156)  C BG605323Ln02P003B01B071R1_04.ab1   (108)   471     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BG605323Ln02P003B01B071R1_04.ab1   579 
  305    BG605323Ln02P003B01B071F1_04.ab1   197 
  409  C BG605323Ln02P003B01B071R1_04.ab1   171 
  541    BG605323Ln02P003B01B071F1_04.ab1   433 
  549  C BG605323Ln02P003B01B071R1_04.ab1    31 
  557    BG605323Ln02P003B01B071F1_04.ab1   449 
  561  C BG605323Ln02P003B01B071R1_04.ab1    19 
  565    BG605323Ln02P003B01B071F1_04.ab1   457 
Contig length: old 734, new 735

Contig length: old 735, new 735
New start: 0