No. words: 1208; after pruning: 1182


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.3 (1,1:472)  454  0.00 0.43 0.00  BG605323Ln05P003B01B071F1_03.ab1        3   472 (156)  C BG605323Ln05P003B01B071R1_03.ab1   (108)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BG605323Ln05P003B01B071R1_03.ab1   580 
  197    BG605323Ln05P003B01B071F1_03.ab1    89 
  301  C BG605323Ln05P003B01B071R1_03.ab1   280 
  305    BG605323Ln05P003B01B071F1_03.ab1   197 
  313  C BG605323Ln05P003B01B071R1_03.ab1   268 
  317    BG605323Ln05P003B01B071F1_03.ab1   209 
  357  C BG605323Ln05P003B01B071R1_03.ab1   224 
  381    BG605323Ln05P003B01B071F1_03.ab1   273 
  409  C BG605323Ln05P003B01B071R1_03.ab1   172 
  437    BG605323Ln05P003B01B071F1_03.ab1   329 
  449  C BG605323Ln05P003B01B071R1_03.ab1   132 
  481    BG605323Ln05P003B01B071F1_03.ab1   373 
  505  C BG605323Ln05P003B01B071R1_03.ab1    76 
  521    BG605323Ln05P003B01B071F1_03.ab1   413 
  529  C BG605323Ln05P003B01B071R1_03.ab1    52 
  573    BG605323Ln05P003B01B071F1_03.ab1   465 
Contig length: old 735, new 736

Contig length: old 736, new 736
New start: 0