No. words: 1197; after pruning: 1171


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:461)  450  0.00 0.22 0.00  BG605323Ln06P003B01B071F1_04.ab1        1   462 (156)  C BG605323Ln06P003B01B071R1_04.ab1   (116)   463     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BG605323Ln06P003B01B071R1_04.ab1   579 
  220    BG605323Ln06P003B01B071F1_04.ab1   103 
  328  C BG605323Ln06P003B01B071R1_04.ab1   252 
  352    BG605323Ln06P003B01B071F1_04.ab1   235 
  360  C BG605323Ln06P003B01B071R1_04.ab1   220 
  476    BG605323Ln06P003B01B071F1_04.ab1   359 
  500  C BG605323Ln06P003B01B071R1_04.ab1    80 
  540    BG605323Ln06P003B01B071F1_04.ab1   423 
  548  C BG605323Ln06P003B01B071R1_04.ab1    32 
  564    BG605323Ln06P003B01B071F1_04.ab1   447 
Contig length: old 735, new 735

Contig length: old 735, new 735
New start: 0