No. words: 1203; after pruning: 1177


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.6 (1,1:466)  453  0.00 0.22 0.00  BG605323Ln08P003B01B071F1_04.ab1        3   467 (156)  C BG605323Ln08P003B01B071R1_04.ab1   (114)   466     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BG605323Ln08P003B01B071R1_04.ab1   580 
  305    BG605323Ln08P003B01B071F1_04.ab1   192 
  313  C BG605323Ln08P003B01B071R1_04.ab1   268 
  353    BG605323Ln08P003B01B071F1_04.ab1   240 
  409  C BG605323Ln08P003B01B071R1_04.ab1   172 
  573    BG605323Ln08P003B01B071F1_04.ab1   460 
Contig length: old 736, new 736

Contig length: old 736, new 736
New start: 0