No. words: 872; after pruning: 832


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.6 (1,1:206)  206  0.00 0.00 0.00  BG607279Sn31P116A11P081G091F1_076.ab1        1   207 (63)  C BG607279Sn31P116A11P081G091R1_076.ab1   (395)   207     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  106 nodes

 55 str. conn. components

Path
    1  C BG607279Sn31P116A11P081G091R1_076.ab1   602 
  399    BG607279Sn31P116A11P081G091F1_076.ab1     4 
  411  C BG607279Sn31P116A11P081G091R1_076.ab1   192 
  415    BG607279Sn31P116A11P081G091F1_076.ab1    20 
  443  C BG607279Sn31P116A11P081G091R1_076.ab1   160 
  451    BG607279Sn31P116A11P081G091F1_076.ab1    56 
  471  C BG607279Sn31P116A11P081G091R1_076.ab1   132 
  475    BG607279Sn31P116A11P081G091F1_076.ab1    80 
  487  C BG607279Sn31P116A11P081G091R1_076.ab1   116 
  495    BG607279Sn31P116A11P081G091F1_076.ab1   100 
  515  C BG607279Sn31P116A11P081G091R1_076.ab1    88 
  519    BG607279Sn31P116A11P081G091F1_076.ab1   124 
Contig length: old 665, new 665

Contig length: old 665, new 665
New start: 0 
S Change at: 343; seg lengths: entry 1, contig 1